Epilepsy: A Comprehensive Textbook
2nd Edition

Chapter 18
Genetics of Epilepsy Syndromes
Ortrud K. Steinlein
Introduction
The term epilepsy describes a heterogeneous group of disorders, with a lifetime cumulative incidence of 3%. There are disorders in which seizures are the main or only symptom, and those in which seizures are just one symptom among others. The reasons why individuals develop epilepsy are numerous. Examples for mostly nongenetic causes of epilepsy are trauma, tumor, and infections. On the other end of the spectrum are epilepsies that have no obvious etiology but are suspected to be mainly genetic in origin. The latter group of epilepsies has been termed idiopathic, in the meaning that they are “not preceded or occasioned by another disorder”32 and that “there is no underlying cause other than a possible inherited predisposition” and “a symptomatic origin is neither detected nor suspected.”33 By now the distinction between symptomatic and idiopathic epilepsies has become blurred because of our growing knowledge about the complex and diverse etiology of epilepsies. Genes for several idiopathic epilepsies have already been discovered, and most of these genes are able to (at least temporarily) change the functional state of the brain. Some of them are expressed during embryogenesis, rendering it possible that some of them might even interfere with normal brain development and cause subtle changes of the brain’s microanatomy. On the other hand, there is a large group of epilepsies and disorders with epilepsy that have been termed “symptomatic” because they are due to known metabolic, neurodegenerative, or structural brain damage. Many of these disorders have by now shown to be caused by clearly defined genetic factors. It is likely that in the future the terms nongenetic epilepsies, genetic epilepsies, and genetic disorders with epilepsy will more and more replace terms like idiopathic and symptomatic. For this chapter exemplary members of both groups have been chosen to illustrate principal etiologic categories of the disorder “epilepsy” and trace the various genetic pathways to epileptogenesis.
Inheritance and Genes in Common Idiopathic Epilepsies
About 30% to 40% of all epilepsies, especially during childhood and adolescence, are summarized under the term idiopathic epilepsies. They can be roughly divided into the group of common, mostly generalized idiopathic epilepsies (IGEs) and the various rare monogenic forms of partial or generalized idiopathic epilepsy. The first group, IGE, includes age-related subtypes like juvenile myoclonic epilepsy, childhood absence epilepsy, juvenile absence epilepsy, and grand mal epilepsy on awakening. The high concordance rates found in twin studies support the hypothesis of an almost complete genetic etiology of IGE.10 Nevertheless, recurrence risks in first-degree relatives of patients with IGE are considerably lower than in monogenic disorders, arguing for an oligogenic or polygenic model of inheritance. It can be assumed that several susceptibility genes are involved in each patient, and that the interaction between these gene loci is multiplicative rather than additive. Some IGE genes might determine the seizure threshold by influencing neuronal excitability, while other susceptibility genes might be responsible for the age of onset and therefore the seizure subtype.146
FIGURE 1. Mutational spectrum in autosomal dominant nocturnal frontal lobe epilepsy. The parts of nicotinic acetylcholine receptor subunit genes CHRNA4 and CHRNB2 containing transmembrane domains II and III are shown.
Two different models have been proposed to explain the complexity of genetic factors and gene–gene interactions in common IGE. In the ancestral common variant complex epilepsy model (ACVCE), the existence of common IGE-associated alleles is assumed. In homogeneous patient samples, such alleles should be detectable by association studies. The second model, named multiple rare variant complex epilepsy model (MRVCE), describes the existence of many different rare, slightly deleterious mutations that cannot be detected by association studies. Both models would be able to explain the complex inheritance patterns seen in IGE, and both common and rare gene variants have already been identified.86 For example, both the ACVCE and the MRVCE models of complex inheritance apply to sequence variants in the T-type calcium channel gene CACNA1H on chromosome 16p13.3. Several rare CACNA1H variants that markedly alter channel properties have been found in patients with childhood absence epilepsy (F161L, E282K, V831M) or other IGE subtypes (P618L, G755D). Interestingly, a common CACNA1H sequence variant exists that, in combination with one of the above-mentioned rare variants, is able to alter the calcium channels’ biopharmacologic properties in a way that neither the rare nor the common variant separately do.67 Additional examples consistent with both the ACVCE and the MRVCE models are found in the GABRD gene that codes for the δ-subunit of the γ-aminobutyric acid (GABA)A receptor. The GABRD sequence variant E177A was described in one family and, compared to wild-type receptors, was shown to significantly reduce the GABAA receptor’s maximal current. A more common GABRD variant, R220H, was detected in both epilepsy patients and controls. Receptors heterozygous for R220H had a significantly decreased peak current in comparison with the wild type; thus, R220H may act additively as a susceptibility factor in combination with other, yet to be identified sequence variants.38 Nevertheless, CACNA1H, GABRD, and other genes that are presently discussed as susceptibility factors probably still account only for a very small fraction of the genetic contribution to common IGE syndromes. Many more genes remain to be discovered, a process that has so far been most successful in the monogenic forms of idiopathic epilepsy described in the next paragraphs.
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Idiopathic Epilepsies Are Often Channelopathies
The progress in identification of genes in monogenic forms of epilepsy illustrates the important role of ion channels in epileptogenesis. A great variety of different ion channels regulate brain excitability and prevent hypersynchronization of neuronal networks. Mutations in any of those ion channels might change the delicate balance between excitatory and inhibitory input, resulting in recurrent firing, hyperexcitability, and, finally, seizures.
Familial Nocturnal Frontal Lobe Epilepsy
In 1994, autosomal dominant nocturnal frontal lobe epilepsy (ADNFLE) was first described as an inherited form of partial epilepsy. ADNFLE is characterized by clusters of brief motor seizures, which occur mostly during non–rapid eye movement (REM) sleep.106 Nonspecific aura phenomena including epigastric, sensory, or psychic symptoms sometimes precede the seizures. The seizures start with gasps, grunts, or some vocalizations followed by thrashing hyperkinetic activity or tonic stiffening of the limbs, often with superimposed clonic jerking. The consciousness is only infrequently impaired. Seizure frequency can be highly variable even within the same family. In some of the patients seizures are frequent and tend to cluster, while in others seizure occurrence is more sporadic and long periods of spontaneous remission are reported. In general, seizure frequency tends to decrease in later adulthood. Physical examinations and brain imaging results are usually normal. Interictal electroencephalographic (EEG) abnormalities are rarely seen, and only some patients show ictal epileptiform activity. The onset of ADNFLE is usually during childhood or early adolescence, with a penetrance of 70% to 80%. Seizures are often, but not in all patients readily controlled by antiepileptic drugs, especially carbamazepine.
Mutations in two genes have so far been identified in different ADNFLE families.46,121 CHRNA4 and CHRNB2 encode the α4- and β2-subunits of the neuronal nicotinic acetylcholine receptor (nAChR), respectively. The first CHRNA4 mutation, a S248F amino acid exchange within the second transmembrane domain, was identified in 1995.121 Descriptions of other nAChR mutations, either in CHRNA4 or in CHRNB2, followed.62,73,98,122 With the exception of one mutation (CHRNB2-I312M in transmembrane domain III), all known ADNFLE mutations are located within the second transmembrane domain. Both the second and the third transmembrane domain contribute to the walls of the ion channel; thus, it seems that only mutations that have a direct effect on the ion pore are able to cause ADNFLE. In total, four CHRNA4 and three CHRNB2 mutations have been described. These include six amino acid exchanges and one small in frame insertion. Some of those mutations have been found again in unrelated families. They offer the opportunity to study the effects differences in genetic and ethical backgrounds might have on the penetrance of the disorder and the clinical features associated with these mutations (Fig. 1).
The nAChRs, like the glycine, GABAA, and serotonin receptors, are members of the large family of ligand-gated ion channels. They are constituted by the assembly of five subunits arranged pseudosymmetrically around the central axis, forming a cation-selective ion pore. Pharmacologic and ligand-binding studies have shown that, depending on their subunit composition, the different subtypes of homo- or heteropentameric nAChRs not only vary with respect to their expression patterns in the brain, but also display different biopharmacologic channel properties.11 Both α4- and β2-subunits are found in almost all brain regions, and the heteropentameric α4/β2 receptor is thought to be the major high-affinity nicotine nAChR subtype in mammalian brain. The surprising and so far not very well understood part is that an nAChR subtype ubiquitously present in brain is able to cause a partial type of epilepsy rather than a generalized one. In support of the recognized importance of the cholinergic system in brain functions, recent work has shown that nAChR mutations not only cause epilepsy, but can also be associated with additional neurologic and psychiatric features or cognitive deficits.29,62,80 Examples are the CHRNA4-776ins3 mutation and the CHRNA4-S252L mutation. The 776ins3 mutation was found in 11 members of a large Norwegian ADNFLE family. Six of the 11 mutation carriers not only had epilepsy, but also had serious psychiatric problems, mostly schizophrenia, negative symptoms of schizophrenia, or recurrent unclassified psychosis. These observations suggest that the 776ins3 mutation may be a risk factor for psychiatric disorders.80 The S252L mutation has been described in two unrelated families of Korean and Japanese origin. In both families the seizures not only tended to be resistant to carbamazepine treatment, but were also associated with a high rate of mental retardation and/or behavioral problems.29,62 The similarities of the clinical phenotype in two families with different genetic background but the same S252L-ADNFLE mutation strongly suggest that the associated neurologic features are mutation specific rather than caused by modifying genes or environmental factors (Fig. 2).
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FIGURE 2. Clinical features frequently associated with different nicotinic acetylcholine receptor mutations in autosomal dominant nocturnal frontal lobe epilepsy families. NFLE, nocturnal frontal lobe epilepsy.
Functional analysis carried out with recombinant nAChR receptors in Xenopus oocytes or HEK cells, including patch clamp characterization of several known ADNFLE mutations, revealed different biopharmacologic profiles.11 Co-expression of the S248F mutation and the wild-type CHRNA4 allele yielded acetylcholine-evoked currents of amplitudes comparable to wild-type receptors but with a higher sensitivity for the natural agonist. Receptors carrying either the 776ins3, S252L, or V287M mutation displayed increased acetylcholine sensitivity but to different degrees compared with the S248F mutation. A reduction of calcium permeability was observed for the mutants S248F and 776ins3 but not for the S252L mutation.11 Increased acetylcholine sensitivity and therefore a gain-of-function effect is the only functional feature common to all known ADNFLE mutations. It is tempting to speculate that the particular functional signatures of each mutant contribute to the above-described observations of associated neurologic features in ADNFLE, while the gain-of-function effect might be responsible for the epilepsy phenotype. The latter part of this hypothesis is supported by the observation that, compared to wild-type litter mates, mice carrying gain-of-function mutations in the CHRNA4 gene are dramatically more sensitive to nicotine-induced seizures. Furthermore, nicotine application in these mice resulted in enhanced hippocampal theta rhythms, as demonstrated by in vivo electrophysiologic recordings. This observation would be consistent with a model in which gain-of-function effects in presynaptically located nAChRs activate inhibitory GABAergic interneurons in the neocortex and hippocampus. The enhanced GABA release could then increase network excitability by inhibiting inhibitory pathways. Alternative models for the epileptogenic effect of nAChR mutations could include a disturbance of hippocampal “peacemaker” theta activity due to increased input from septal cholinergic neurons.
Benign Familial Neonatal Convulsions
Benign familial neonatal convulsions (BFNC) is a rare autosomal dominant seizure disorder of the newborn (see also Chapter 223). The disorder is characterized by an age of onset between the first day and, latest, the fourth month of life. The seizures are mostly unprovoked, generalized, or multifocal and of the tonic and/or clonic type. The course of the disorder is often benign and self-limiting, and, with or without pharmacotherapy, in most patients the seizures remit spontaneously within a few days or weeks.103,137 Later in life seizures can reoccur in up to 15% of the patients, starting mostly at school age or in young adulthood. These so-called late-onset seizures tend to be infrequent and are often provoked, for example, by lack of sleep. Several untypical BFNC patients with a more severe course of the disorder have been described. These patients often show a higher frequency of seizures and seizures still occur after the age of 4 months. Follow-up studies often revealed moderate delays of psychomotor development, and in some patients have a family history positive for epilepsy and mental retardation. Two BFNC families have come to attention in which a mutation carrier developed drug-resistant seizures and/or epileptic encephalopathy shortly after birth, resulting in severe psychomotor retardation. In one of the two severely affected index patients a de novo mutation was found, while the second index patient inherited his mutation from a parent with typical “benign” BFNC.36,109 It remains unclear if these two patients had a second yet unrecognized condition or if certain risk factors (e.g., perinatal hypoxia) in combination with a BFNC mutation increase the risk for such an unfavorable outcome.
The molecular basis of BFNC is a mutation in the voltage-gated potassium channel genes KCNQ2 or KCNQ3 (chromosome 20q13.3 and 8q24, respectively).13,27,115 Both the KCNQ2 and KCNQ3 genes encode ion channel subunits that are composed of six transmembrane domains. The subunits have identical structures including a voltage sensor in transmembrane domain 4, a loop between transmembrane domains 5 and 6 that builds the ion channel pore, and a long C-terminal region of unknown function. The BFNC mutations found so far in KCNQ2 are either missense mutations located in one of the transmembrane domains or truncating mutations (including nonsense, insertion/deletions, and splice site mutations) located mostly in the C-terminal region. Most mutations are private, meaning that they have not been found in other BFNC families. So far, only three mutations have been found in KCNQ3. All known KCNQ3 mutations are missense mutations located within the vicinity of the pore region.
KCNQ2 and KCNQ3 encode subunits of the M-channel, a very slowly opening and closing potassium channel that is ubiquitously found in brain.141 The M-current, first discovered some 20 years ago,21 is a powerful controller of neuronal repetitive firing. M-currents regulate the number of action potentials of individual neurons by opposing sustained membrane depolarization. M-channels activate at membrane potentials that are more negative than the action potential threshold and at which few other ion channels are active. Therefore, they can be assumed to have a pivotal role in the stabilization of membrane potentials and are likely to control excess neuronal excitability and prevent seizures. Expression studies in Xenopus oocytes and HEK cells have shown that BFNC mutations cause only modest reductions (20% to 30%) of potassium currents in reconstitution experiments. It seems, therefore, that even slight alterations of M-channel activity are sufficient to cause seizures.13
Exceptions to this haploinsufficiency concept are some rare KCNQ2 mutations that appear to have a dominant negative effect on channel function, as demonstrated by a >50% reduction in current magnitude. One of these mutations is KCNQ2/R207W, which causes the BFNC/myokymia syndrome. The mutation abolishes the third of six positive charges in transmembrane domain 4 that is thought to represent the voltage sensor in the cation channel superfamily. The R207W amino acid exchange was the first KCNQ2 mutation described that causes a disorder with symptoms outside the central nervous system; it is associated not only with episodic symptoms, but also with continuous symptoms. On the clinical level, heterozygosity for the R207W mutation causes both BFNC and myokymia, a spontaneous and repetitive involuntary contraction of muscle fiber groups.37 In the BFNC/myokymia syndrome, multifocal or generalized tonic–clonic convulsions typically start around day 3 after birth and disappear spontaneously after a few weeks or months. Electromyographic (EMG) recordings in the patients are initially normal but,
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starting in infancy, reveal spontaneous repetitively discharged normal motor unit potentials of 20 to 60 msec in duration. Generalized myokymia with spontaneous finger twitching occurs some years later. The association with both central and peripheral neurologic symptoms might be explained by the unusual electrophysiologic profile of the underlying mutation. R207W causes a loss of K+ current, whose magnitude depends strongly on the pattern and time course of depolarization. With short periods of depolarization the loss of current is more severe than with other known BFNC mutations. The dominant negative effect is not observed with longer periods of activation. Thus, at long (>1 second) trains of action potentials or during seizure activity, R207W mutant channels may be activated significantly and may even reach wild-type levels. It is possible that the time-dependent dominant negative effect of R207W establishes itself only in the peripheral nervous system and that this might be the reason for peripheral neurologic symptoms like myokymia. This hypothesis rests on the assumption that the neuronal activity of motoneurons is interrupted by longer quiescent periods than is the activity of central neurons whose hyperexcitability triggers seizures. Under such conditions, the dominant negative effect of the R207W mutation would have consequences for motoneurons but not for central neurons.37
In mice, KCNQ2 knockout experiments resulted in early postnatal lethality in homozygous animals, while hemizygous knockout mice developed and behaved normal but showed an increased sensitivity to pentylenetetrazole, an epileptic inducer.142 Transgenic mice that conditionally express a dominant negative KCNQ2 pore mutation in the brain only during defined developmental periods demonstrated the critical role of M-channel activity in early postnatal brain development. Suppression of the M-current during the first postnatal weeks was associated with spontaneous seizures, behavioral hyperactivity, and morphologic changes in the hippocampus.96 These results support the notion that M-currents are critical determinants of cellular and neuronal network excitability. The changes in brain morphology found in transgenic mice also raise the interesting question of whether BFNC caused by KCNQ2 mutations in humans might be (at least in part) due to submicroscopic structural brain changes (morphologic etiology) rather than exclusively to a reduction of M-currents (functional etiology).
Benign Familial Infantile Convulsions
Benign familial infantile convulsions (BFIC) can be distinguished from BFNCs by a later age at onset135 (Fig. 3). The autosomal dominant disorder is characterized by the onset of seizures around 6 months of age (range 3 to 9 months). Seizures occur in clusters and respond well to antiepileptic drug treatment. The seizures are partial with secondary generalization and in most patients spontaneous remission has occurred by the age of 12 months. Usually no subsequent neurologic abnormalities develop. Two putative loci were reported, BFIC1 (19q) and BFIC2 (16p12-q12), but no genes have been identified yet.23,54 Interestingly, three other disorders with overlapping neurologic features map to the same region as BFIC2: The infantile convulsions and choreoathetosis syndrome (ICCA; OMIM 602066),124 paroxysmal kinesigenic choreoathetosis (PKC; OMIM 128200),129 and a syndrome comprising rolandic epilepsy, paroxysmal exercise-induced dystonia, and writer’s cramp (EPRPDC; OMIM 608105).53 Therefore, the possibility exists that the four disorders are allelic.
FIGURE 3. Age of onset and remission in benign familial neonatal convulsions (BFNC), benign familial neonatal/infantile convulsions (BFNIC), and benign familial infantile convulsions (BFIC).
A rare seizure disorder with an age of onset intermediate between BFNC and BFIC is benign familial neonatal/infantile convulsions (BFNIC). BFNIC has been shown to be caused by mutations in the voltage-gated sodium channel subunit gene SCN2A9,61 (Fig. 3).
Febrile Seizures
Febrile seizures (FSs) affect 5% to 10% of children under the age of 6 years. Twin and family studies demonstrated the involvement of genetic factors in the etiology of febrile seizures. In most patients an oligo- or polygenic background rather than a monogenic one can be assumed, and a substantial degree of heterogeneity is likely. However, rare families with an apparent autosomal dominant mode of inheritance have been described, and linkage studies identified several putative gene loci, including FEB1 on chromosome 8q13-q21, FEB2 on 19p, FEB3 on 2q23-q24, FEB4 on 5q14-q15, FEB5 on 6q22-q24, and FEB6 on 18p11.2.64,81,88,90,92,138 In one family with febrile and afebrile seizures, a nonsense mutation (S2652X) was identified in the MASS1 gene. MASS1 is part of the large G-protein coupled receptor gene VLGR1.90 The mutation causes a deletion of the C-terminal 126 amino acid residues in the predicted MASS1 protein. If confirmed in independent families, MASS1 can be regarded as a rare cause for familial febrile convulsions. In another family a missense mutation in the SCN1A gene chromosome 2q23-24 has been found to cosegregate febrile seizures, indicating that familial febrile seizures should also be considered a channelopathy.81
FIGURE 4. Clinical phenotypes in generalized epilepsy with febrile seizures plus (GEFS+). Range of phenotypes found in GEFS+ families is shown. Febrile seizure plus phenotypes include febrile seizures that persist beyond the age of 6 years and/or febrile seizures overlapped or followed by different types of (mostly generalized) afebrile seizures. (Adapted from Baulac S, Gourfinkel-An I, Nabbout R, et al. Fever, genes, and epilepsy. Lancet Neurol. 2004;3:421–430.)
Generalized Epilepsy with Febrile Seizures Plus and Dravet Syndrome
Febrile seizures are the most common seizure type in families with the recently described syndrome of generalized epilepsy with febrile seizures plus (GEFS+) (see also Chapter 256), followed by febrile seizures plus (FS+; seizures with fever may persist beyond the age of 6 years and/or may be associated with variable afebrile seizures). Afebrile seizure types in affected GEFS+ individuals include generalized tonic–clonic, myoclonic, absence, and atonic seizures or, at least in some families, partial seizures105 (Fig. 4). Given the highly variable clinical phenotype, it is not surprising that the mode of inheritance underlying GEFS+ is still a matter of debate. Although in some families the trait is likely to be autosomal dominant, in others it is probably better described as oligogenic or as a major gene effect. A genetic concept involving more than one gene would also better fit the clinical variability observed within and between GEFS+ families. The first GEFS+ mutation (C121W) was identified in the SCN1B gene on chromosome 19q13.1.
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SCN1B encodes a small accessory subunit of the voltage-gated sodium channel. The mutation C121W can be predicted to disrupt a disulphide bridge and to interfere with the ability of the β-subunit protein to modulate the function of the much larger, pore-forming α-subunits.140 Subsequent studies showed that most GEFS+ mutations are located in the gene coding for the α1-subunit of the voltage-gated sodium channel, SCN1A, on chromosome 2q24.41 SCN1A codes for a large ion channel protein composed of four domains, each containing six transmembrane segments (S1 to S6). Minor GEFS+ genes are SCN2A, coding for the γ2-subunit gene of the voltage-gated sodium channel, or the γ2-subunit gene of the GABAA receptor (GABRG2).8,56,66,82,123,139
Mutations in the SCN1A gene have also been identified in the majority of patients with the syndrome of severe myoclonic epilepsy of infancy (SMEI = Dravet syndrome; also Chapter 230) and in some cases of phenotypically overlapping syndromes like borderline SMEI (SMEB) or intractable childhood epilepsy with generalized tonic–clonic seizures (ICEGTC).31,45 The clinical phenotype of SMEI is characterized by an initially normal psychomotor development, onset of febrile seizures within the first year of life, and subsequent manifestation of various afebrile seizure types including absence, myoclonic, and partial seizures. During the second year of life psychomotor delay becomes evident.
Although caused by the same gene, SCN1A, differences in the mutation detection rates and the mutational spectrum present in GEFS+ and SMEI patients are obvious.87 SCN1A mutations are only found in 5% to 10% of GEFS+ patients but are present in 33% to 100% of SMEI patients (the variation is likely to be due to different mutation detection methods and/or patient inclusion criteria). All known GEFS+ mutations are missense mutations that cause amino acid exchanges in the encoded protein, while SMEI mutations are composed of truncating (nonsense or frame shift) mutations (47%), missense mutations (43%), splice site mutations (7%), and deletions (3%). Nearly all reported SMEI mutations (76 of 80) are de novo; only a few of them (4 of 80) were inherited from a parent with a less severe type of epilepsy. Mutations in SMEI tend to be either truncating and/or located in functionally critical parts of the gene. GEFS+ mutations are mostly found in less highly conserved parts of SCN1A such as the distal parts of S1 to S4 segments or in the short loops connecting those segments (Fig. 5). It is therefore likely that SMEI and GEFS+ mutations differ with respect to their predicted impact on ion channel function. SMEI mutations can be expected to cause a more severe disturbance of protein function, consistent with the more severe phenotype.
FIGURE 5. Schematic representation of SCN1A mutational spectrum in generalized epilepsy with febrile seizures plus (GEFS+) and severe myoclonic epilepsy of infancy (SMEI). All reported GEFS+ mutations are missense mutations. In SMEI different types of mutations are found, and most of these mutations are either truncating mutations or missense mutations affecting functionally important structures like the channel’s ion pore. (Adapted from Baulac S, Gourfinkel-An I, Nabbout R, et al. Fever, genes, and epilepsy. Lancet Neurol. 2004;3:421–430.)
The exact functional effects of SMEI and GEFS+ mutations and their correlations to clinical phenotypes are still unclear. Expression studies of SCN1A channels with different SMEI and GEFS+ mutations in Xenopus oocytes or HEK293 cells showed a variety of biophysical aberrations including complete loss of function, altered gating properties, and even gain-of-function effects.77,78,101 These conflicting results can probably partially be explained by different experimental setups, since the biophysical properties of voltage-gated sodium channels strongly depend on the expression system used in the experimental setup. SCN1A channels expressed in HEK293 cells are known to differ from those expressed in Xenopus oocytes with respect to their kinetic properties and their sensitivity to β-accessory subunits. Furthermore, to be able to compare the different functional studies, the question needs to be addressed whether SMEI and/or GEFS+ mutations alter channel surface expression by affecting gene transcription, mRNA stability, protein folding, or trafficking.
Another syndrome of early childhood epileptic encepha- lopathy that is phenotypically and etiologically related to both SMEI and GEFS+ is ICEGTC. Both GEFS+ and ICEGTC are severe types of early childhood epilepsy that are characterized by fever sensitivity, intractable seizures, and developmental decline after seizure onset. Contrary to GEFS+, myoclonic or absence seizures usually do not occur in ICEGTC patients. SCN1A mutations were found in 7 of 10 ICEGTC patients. All mutations were missense mutations that were, similar to SMEI mutations, either located in highly conserved (S4 to S6, pore loop) or, as in GEFS+, less conserved parts of the gene (S1 to S4). Two of the seven published ICEGTC patients inherited their SCN1A mutations from a parent with GEFS+-like epilepsy, raising the possibility that additional genetic and/or environmental factors contribute to the more severe phenotype in ICEGTC.45
Novel Gene Families in Idiopathic Epilepsy
Most of the genes mentioned above either code for ligand-gated or voltage-gated ion channels (i.e., CHRNA4/B2, GABRG2, KCNQ2/3, SCN1A/2A) or for proteins that modulate ion channel function (i.e., accessory channel subunits). Recently, genes of so far unknown function belonging to newly identified gene families were found in some rare idiopathic epilepsies. The first of those was the LGI1 gene discussed below. These
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findings demonstrate that “channelopathies” are not the only etiologic concept in idiopathic epilepsies, but that other mechanisms might exist.
Autosomal Dominant Lateral Temporal Lobe Epilepsy
The syndrome of autosomal dominant lateral temporal lobe epilepsy (ADLTE, also named autosomal dominant partial epilepsy with auditory features [ADPEAF]) is characterized by simple partial seizures with mainly acoustic and sometimes even visual hallucinations.144 The age of onset is usually in the second or third decade of life. In some families the seizures tend to start with a brief sensory aphasia without reduced consciousness.51 In 2002, positional cloning efforts let to the identification of the LGI1 gene (leucine-rich glioma inactivated gene 1) on chromosome 10q24 as the gene responsible for ADLTE/ADPEAF.44,51,65,85,100 The mutational spectrum includes both missense mutations and truncating mutations, and no mutation hotspot has emerged yet. There are no obvious clinical differences between patients with truncating mutations and those with amino acid exchanges in the LGI1 gene.
Table 1 Neuronal Ceroid Lipofuscinoses (NCL)
Disorder Alias Gene Locus Protein Inheritance
Infantile NCL CLN1 Santavuori-Haltia disease PPT 1p32 Palmitoyl-protein thioesterase-1 AR
Late infantile NCL CLN2 Jansky-Bielschowsky disease CLN2 11p15.5 Pepstatin-insensitive lysosomal peptidase AR
  CLN5 Finnish variant CLN5 13q21.1-q32 nn AR
  CLN6 CLN6 15q21-q23 Linclin AR
Juvenile NCL CLN3
Vogt-Spielmeyer disease
Batten disease
CLN3 16p12.1 nn AR
Adult NCL CLN4
Kufs disease, autosomal recessive type
PPT 1p32 Palmitoyl-protein thioesterase-1 AR
  CLN4
Kufs disease, autosomal dominant type Parry disease
nn AD
AD, autosomal dominant; AR, autosomal recessive; nn, not known.
So far the function of the LGI1 gene, which shows a strong expression in neurons within the temporal lobe, is mostly unknown. The LGI1 protein has a distinctive leucine-rich repeat (LRR) motif in its N-terminal end. This motif might be indicative of either receptor function or an interaction with the extracellular matrix. The LRR motif consists of repeated β-strands and α-helices connected by loops, building a domain that usually serves as a framework for the formation of protein–protein interactions and is present in a large number of proteins with diverse functions. The C-terminal half of the LGI1 protein contains seven epilepsy-associated repeats (EARs). EARs are characterized by tandem repeats with a core of about 50 residues that probably folds into a β-propeller structure.120 The EARs were also identified in another epilepsy-relevant protein, MASS1/VLGR1, which is mutated in audiogenic epilepsy in mice and in one family with febrile seizures (see above).91,116 Within the MASS1/VLGR1 protein, the epitempin repeat is part of the ligand-binding ectodomain, suggesting that this repeat, like the LRR domain, might be involved in protein–protein interactions.
LGI1 was first found to be interrupted by a translocation breakpoint in a glioblastoma cell line and was therefore labeled as a candidate tumor suppressor gene for gliomas.28 This theory seemed to be supported by the observation that LGI1 expression is low or absent in high-grade gliomas.12
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However, it has been demonstrated that LGI1 is mainly expressed in neurons rather than in glia cells.52 Therefore, a gradual loss or displacement of neurons during progression toward higher malignancy would be a plausible explanation for the low or absent LGI1 expression in high-grade gliomas. The absence of LGI1 expression would then represent a secondary effect rather than a causative event. This interpretation is supported by studies that found fewer LGI1-expressing cells in high-grade gliomas compared with low-grade tumors.12 Furthermore, no evidence was found that the LGI1 mutations present in ADLTE families increase the rate of brain tumors or other malignancies. It is therefore unlikely that LGI1 acts as a first step or high penetrance tumor suppressor gene.20 Nevertheless, experimental evidence exists that LGI1 plays a role in the suppression of cell migration. For example, experimentally forced expression of LGI1 significantly reduced the proliferation and migration ability of glioma cells. Invasion assays showed that glioma cells transfected with LGI1 lost their ability to migrate freely. These results suggest that LGI1 is involved in cellular control mechanisms concerning migration and invasiveness. Thus, the possibility remains that, although not a bona fide tumor suppressor gene, LGI1 plays a role in determining the malignancy grade of an already existing tumor.70 It will be interesting to know if LGI1 also plays a role in the migration of neuronal cells during embryogenesis. ADLTE/ADPEAF mutations that interfere with such a function could theoretically cause subtle changes in the brain’s cytoarchitecture that might cause seizures through abnormal neuronal networks.
Genetic Disorders with Seizures as a Primary Feature
Seizures are an unspecific symptom commonly associated with structural or functional brain damage. It is therefore not surprising that seizures are a predominant feature in a variety of neurogenetic disorders of diverse etiology. Examples are neurodegenerative metabolic disorders, mitochondrial disorders affecting cellular energy metabolism, structural chromosomal aberrations, and neuronal migration disorders. The seizures might be the leading symptom or just one symptom among others. Unlike in the above-discussed idiopathic epilepsies, the seizures are often difficult to control. In some of these disorders the underlying mutations affect the mitochondrial DNA (mtDNA), but most mutations are found in nuclear genes or chromosomes. The modes of inheritance and the recurrence risks depend on the type of mutation, its localization in the genome, and the effect this mutation has on the phenotype.
Neurodegenerative and Metabolic Disorders with Epilepsy
Seizures and myoclonus are common to many neurodegenerative and metabolic disorders (see also Chapter 261). In the following paragraphs some of the disorders in which epilepsy and/or myoclonus constitute a major feature are exemplarily described.
Neuronal Ceroid Lipofuscinoses
There are at least eight human disorders belonging to the group of neuronal ceroid lipofuscinoses (CLN1 to CLN8).49 The neuronal ceroid lipofuscinoses (NCL) subtypes, which mainly differ with respect to their age of onset, are characterized by progressive visual failure, epilepsy, and myoclonus. Accumulations of an autofluorescent lipopigment in lysosomes of neurons and other cell types are a characteristic feature of NCL. The NCLs are lysosomal proteinoses, and most of them are autosomal recessively inherited. Depending on the subtype and the mutated gene underlying this subtype, the composition of the lysosomal storage material can differ. In the infantile form, mainly sphingolipid activator proteins (saposins A and D) are stored, while in the late infantile and juvenile NCL subtypes mitochondrial adenosine triphosphate (ATP) synthase subunit C is the main storage material. The genes for several NCL subtypes have been identified, but the function of most of them is still unknown73 (Table 1).
The infantile subtype of NCL, Santavuori-Haltia-Hagberg disease (CLN1), occurs primarily in the Finnish population and is caused by mutations in the gene for palmitoyl-protein
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thioesterase on chromosome 1p32. The age of onset is within the first or second year of life, and the course is characterized by profound mental and motor deterioration, hypotonia, ataxia, myoclonus, epilepsy, and blindness. Death usually occurs at age 8 to 11 years. The mutations in the palmitoyl-protein thioesterase gene render enzyme activity in the brain of patients undetectable, causing intracellular accumulation of polypeptides.134
The classical late infantile form of NCL, Jansky-Bielschowsky disease (CLN2), starts at age 2 to 4 years with myoclonus and seizures. Additional clinical features are dementia and blindness with macular degeneration and retinitis pigmentosa. Death occurs by the age of 15 years. CLN2 is caused by mutations in a gene named tripeptidyl peptidase-1 that is likely to code for a lysosomal pepstatin-insensitive carboxypeptidase.117
Juvenile-onset NCL (Batten disease, Vogt-Spielmeyer disease) is the most common neurodegenerative disorder of childhood with an incidence of 1 in 25,000 births. Onset begins with visual failure at age 5 to 10 years, followed by epilepsy and mental deterioration. The exact function of the CLN3 gene, which is mutated in juvenile NCL, is still unknown. Functional studies suggest that the CLN3 gene product is an integral membrane protein that localizes primarily to the Golgi apparatus and is thought to have a role in neuronal transport pathways.79,127
Kufs disease or adult NCL (NCL4) is distinguished clinically from the infantile and juvenile subtypes by onset of progressive myoclonus epilepsy in adulthood and by absence of ocular involvement. The autosomal recessive form of Kufs disease is, in at least one family, caused by mutations in the above-mentioned palmitoyl-protein thioesterase-1 gene. There is also an autosomal dominant variant of Kufs disease for which no gene has been identified yet.132
There are at least three disorders that belong to the subgroup of late infantile NCL. These include the Finnish variant (CLN5), a variant of late infantile NCL (CLN6), and the Turkish variant of NCL (CLN8). All three variants are caused by genes of unknown function that probably encode lysosomal proteins or proteins located in or outside the endoplasmic reticulum (ER).47,104 The CLN8 gene also causes Northern epilepsy or progressive epilepsy with mental retardation. Northern epilepsy is a recently described novel autosomal recessive epilepsy of childhood onset that is only found in parts of northern Finland. Age of onset is between 5 and 10 years, followed by progressive mental deterioration. Ocular affection has not been reported in those patients, and life expectancy is considerable longer than in other NCL subtypes. The CLN8 gene encodes a novel transmembrane protein of unknown function. CLN8 protein is probably located outside the ER and might be involved in vesicular neuronal transport mechanism76 (Table 1).
Juvenile Sialidosis
The cherry red–spot myoclonus syndrome or juvenile sialidosis (sialidosis type 1, mucolipidosis) is an autosomal recessive storage disorder.39,119 The patients show a slowly progressive reduction of vision and a crippling myoclonus epilepsy. Onset is usually in the second to third decade. A characteristic feature are cherry-red spots in the macula; however, the age of appearance of the spots is extremely variable, and they are therefore not always helpful to establish the diagnosis. Seizures and myoclonus start in the second decade of life. Two different types of myoclonus might appear in patients: A stimulus-insensitive facial myoclonus without a corresponding EEG correlate or a stimulus-sensitive generalized myoclonus with massive jerks associated with EEG spikes. Juvenile sialidosis is caused by mutations in the NEU1 gene located on chromosome 6p21.3. NEU1 encodes a neuraminidase and mutations in this gene are suspected to interfere with substrate binding or impaired folding of the enzyme.110 This consequently leads to progressive lysosomal storage of sialylated glycopeptides and oligosaccharides.15,94 The excretion of sialic acid covalently linked to a variety of oligosaccharides and/or glycoproteins is a typical feature, but oligosacchariduria is often no longer detectable if diagnosis is delayed into adulthood.
Dentatorubral-Pallidoluysian Atrophy
The autosomal dominant syndrome of dentatorubral-pallidoluysian atrophy (DRPLA) is mostly found in Japan, but reports of several families of non-Japanese ancestry have been published. DRPLA presents with variable combinations of epilepsy, myoclonus, cerebellar ataxia, choreoathetosis, and dementia.89,118 Three clinical phenotypes are evident in DRPLA; one is dominated by initial ataxia and subsequent choreoathetosis, one is Huntingtonlike with choreatic movements and dementia, and the third is characterized by progressive myoclonus epilepsy. The age of onset is extremely variable and ranges from 6 to 70 years. Anticipation has been reported in several families.136 These observations can be explained by the fact that DRLPA belongs to the group of trinucleotide repeat disorders and is caused by an expanded CAG repeat in the DRPLA gene on chromosome 12p13.69 Normal alleles usually have up to 35 repeats, whereas pathologic alleles (full mutation alleles) have 40 to 100 CAG repeats. The full mutation alleles show somatic mosaicism and intergenerational instability. Large increases in repeat length are usually associated with paternal transmission. The repeat size correlates closely with the age of onset and the severity of the disorder. Translated into protein, such expanded polyglutamine stretches have been shown to form aggregates that have a toxic effect on cells. Intracellular accumulation of DRPLA protein and subsequent neurodegeneration are widespread in the central nervous system. The aggregate formation potential of mutated DRPLA protein increases in a CAG-repeat length-dependent manner, explaining the earlier age of onset in patients with larger repeat sizes.93,113
FIGURE 6. Heteroplasmy in mitochondrial inheritance. Cells contain hundreds of mitochondria that behave as semiautonomous organisms and multiply by replication rather than by de novo synthesis. When a cell divides it is a matter of chance which mitochondria will be partitioned in which daughter cell. The resulting mixed population of mutated and wild-type mitochondria is known as heteroplasmy. In heteroplasmy the percentage of mutated mitochondria varies not only from one offspring to the next, but also from tissue to tissue within the same individual. Filled black circles indicate mitochondria containing mutated mitochondrial DNA.
Unverricht-Lundborg Disease
Unverricht-Lundborg disease (ULD; also known as Baltic or Mediterranean myoclonus epilepsy) is the most common form of progressive myoclonus epilepsy worldwide. ULD is an autosomal recessive neurodegenerative disorder characterized by progressive stimuli-sensitive myoclonic jerks and generalized tonic–clonic seizures. The age of onset is between 6 and 18 years of age, and the course of the disorder is usually about 10 to 20 years in duration. Mental deterioration, intention tremor, dysarthria, and mild ataxia may develop in later stages of the disorder. Pathologic findings demonstrate a marked loss of Purkinje cells in the cerebellum, neuronal loss in the spinal cord and the medial thalamus, and a proliferation of Bergman glia.55 Mutations in the CSTB gene (cystatin B, also stefin B) on chromosome 21q22.3 have been found in ULD patients. In most patients the disorder is caused by an unstable expansion of a dodecamer repeat located upstream of the initiation codon of CSTB.72 Northern blot analysis demonstrated that tissues from patients carrying the expanded repeat have no detectable CSTB mRNA levels. It can therefore be assumed that in these patients ULD is caused by loss of function mutations in the CSTB gene. In addition to the repeat mutation, seven other mutations have been identified that can be predicted either to alter the structure of CSTB or to cause alternative splicing. CSTB encodes the cystatin B protein, a widely expressed cysteine protease inhibitor that is thought to have a lysosome-associated physiologic function.74,95 A major pathophysiologic
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mechanism in ULB is probably the loss of CSTB-mediated protection from protein degrading in neurons.1 It has also been hypothesized that, at least in a subset of ULD patients, mutated cystatin B protein itself may aggregate and have a toxic effect on the cell.
Lafora Disease
Lafora disease (LD) is an autosomal recessive disorder of adolescent onset that belongs to the group of progressive myo- clonus epilepsies. LD is characterized by severe myoclonus, epilepsy, and rapidly progressive dementia. Death usually occurs within 10 years of onset. Rare forms exist that show a somewhat more benign course of the disorder. The diagnosis can be established by the presence of characteristic periodic acid-Schiff (PAS)–positive inclusions, the Lafora bodies, in skin biopsy. Lafora bodies are dense aggregates of abnormally branched glycogen molecules (polyglucosans) that are found in both eccrine duct cells and apocrine myoepithelial cells from LD patients. The Lafora bodies also form in various other tissues and organs like the central nervous system, retina, axis cylinders of spinal nerves, heart muscle, liver cells, and striated muscle fibers.2,25,57 Recent studies have shown that LD can be caused by mutations in either the EPM2A gene (laforin) on chromosome 6q24 or the NHLRC1 gene (malin) on chromosome 6p22.3.26,84 A clinical analysis found that LD patients with NHLRC1 mutations had a slightly longer disease course and later age at death compared to patients with EPM2A mutations.50
Laforin is a protein tyrosine phosphatase with a carbo- hydrate-binding domain in the N-terminus, while malin is an E3 ubiquitin ligase containing a zinc finger of the RING type in the N-terminal half and 6 NHL-repeat domains in the C-terminal half. It has been demonstrated that laforin is a physiologic substrate of malin. Normally, malin interacts with and polyubiquitinates laforin, leading to its degradation. Mutations in malin found in LD patients diminish this interaction. It has been suggested that laforin’s role is to detect polyglucosan appearances during glycogen synthesis and prevent the accumulation of insoluble glycogen molecules resulting from glycogen synthetase overreactivity.43,75 Thus, one of several possible scenarios would be that the neurodegenerative changes underlying LD occur because loss-of-function mutations in malin cause the accumulation of laforin and lead to suppression of glycogen metabolism. Patients with mutations in laforin would develop LD because laforin would be unable to dephosphorylate a necessary substrate in glycogen metabolism.48
Epilepsies with Mitochondrial Inheritance
The chromosomes located in the nucleus are not the only source of coding DNA in our cells. Mitochondria, the reminders of an ancient endosymbiosis between early eucaryotic cells and a proteobacteriumlike ancestor over 1.5 billion years ago, possess their own circular DNA molecule (mtDNA). The original bacterial genome lost most of its genes during evolution, and the few genes that survived on the mtDNA until today can be separated into two groups. Mitochondrial genes either code for proteins that take part in the process of aerobic respiration or code for the mitochondria’s transcription/translation system. Mitochondrial inheritance differs from mendelian inheritance in several aspects. The inheritance is strictly maternal, since the sperm mitochondria are selectively eliminated at fertilization. Mutations in mtDNA that seriously harm or abolish the ability of mitochondria to perform their various cellular processes are always heteroplasmic. Heteroplasmic disorders are characterized by a mixed intracellular population of normal and mutated mitochondria. With each cell division it is a matter of chance how many mutated and how many wild-type mitochondria each daughter cells inherits. Hence, heteroplasmy is one of the reasons for the great clinical variability typical for most mitochondrial disorders (Fig. 6).
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Myoclonic Epilepsy and Ragged-Red Fiber Disease
Myoclonic epilepsy and ragged-red fiber disease (MERRF) is characterized by progressive myoclonus epilepsy, myopathy, and slowly progressive dementia. Hearing loss and ataxia are common, and patients often develop multiple lipomas or cervical lipomatosis. In most patients ragged-red fibers and abnormal mitochondria with concentric cristae are found in muscle biopsy. Onset ranges from childhood to late adulthood, and, consistent with a heteroplasmic population of mtDNAs, the severity of the disorder can vary considerably, even within one and the same family. In approximately 80% to 90% of patients, MERRF is caused by the T8344C point mutation that affects the tRNALysine gene within the mtDNA.114 Rare MERRF point mutations are T8356C and G8344A, but the syndrome can also be caused by other types of mtDNA mutations including single or multiple deletions. Furthermore, there are several mutations that can cause more than one mitochondrial disorder. An example is the MELAS mutation G8344G that is sometimes found in MERRF patients. The proportion of mutated mitochondria varies between different tissues in MERRF patients. Skeletal muscle frequently has the highest percentage of mutated mtDNAs and correlates best with the clinical severity of the disorder. Muscle biopsy is therefore the first choice for diagnostic mutation analysis.17
The G8344A mutation in the tRNALysine gene has been shown to inhibit mitochondrial protein synthesis. The translation efficiency and the cytochrome C oxidase activity decline sharply in mutation-carrying mitochondria. Cells with an intracellular percentage of mutated mtDNA that exceeds 85% are extremely sensitive to further damage.17 It has been speculated that these cells need to accumulate only a few more age-related somatic mtDNA mutations in order to decompensate and cause clinical symptoms. The need for an accumulation of somatic mtDNA mutations in addition to the inherited mtDNA defect would explain the delayed onset and progressive course of the disorder.34,58,131 Further discussion is available in Chapter 262.
Chromosomal Rearrangements
Cytogenetically visible chromosomal rearrangements often cause the loss or gain of several or many genes. Since approximately 50% of our genes are, at least temporarily, expressed in brain, the resulting cross-genetic imbalance can be expected to cause major structural or functional disturbances in the central nervous system. It is therefore not surprising that seizures are a common finding in these patients.107 Most chromosomal rearrangements occur de novo in one of the parental germ cells. Thus, even taken into account the rare possibility of a parental germ cell mosaicism, the recurrence risk for siblings is small in these families. Nevertheless, parents need to be karyotyped to exclude the possibility of familial chromosomal rearrangements. Such familial chromosomal rearrangements are mostly balanced translocations where two or more chromosomes exchanged fragments or whole chromosomes are fused together. The carrier of such a balanced translocation is phenotypically normal since he or she has the correct gene copy number, but can have germ cells with an unbalanced chromosomal status. This increases the risk for spontaneous abortions and/or the birth of a severely affected child. Given the number of chromosomes in our cells and size of our genome, the possibilities for individual chromosomal rearrangements are countless. Most of them have been described only in a single or few patients and no typical patterns of clinical features are known. Exceptions are structural rearrangements of certain chromosomal regions that, often due to the presence of repeated DNA elements, have an above-average chance to occur. The underlying mechanism is often a mispairing and incorrect exchange between homologous chromosomes in meiosis. An example that is frequently associated with epilepsy is the inv dup(15) marker chromosome.30 Additional examples for clinically well-defined syndromes caused by structural chromosomal aberrations are the ring chromosome 20 syndrome, Miller-Dieker syndrome (see also Neuronal Migration Disorders), most cases of Angelman syndrome, Wolf-Hirschhorn syndrome, and the 1p36 deletion syndrome.
Inv Dup(15) Syndrome
The karyotype in individuals with inv dup(15) or idic(15) syndrome is characterized by an extra structurally abnormal chromosome.35 The supernumerary marker chromosome is formed by the inverted duplication of proximal chromosome 15. Two types of inv dup(15) marker chromosomes with different phenotypic consequences are known. One is a metacentric or submetacentric chromosome that contains mainly heterochromatin and is usually associated with a normal phenotype (karyotype dic[15][q11]). The second type of inv dup(15) (karyotype dic[15][q12 or q13]) is the one that causes the inv dup(15) syndrome. This marker chromosome is considerably larger and contains, among other genes, the Prader Willi/Angelman syndrome critical region.
Functionally, the inv dup(15) syndrome results from gene dosis imbalances due to tetrasomy 15p and partial tetrasomy 15q. The inv dup(15) is the most common of the heterogeneous group of the extra structurally abnormal chromosomes. The estimated incidence at birth is 1 to 30,000. Patients with inv dup(15) syndrome show moderate to profound developmental delay/mental retardation. Physically, muscle hypotonia is the most common clinical feature, whereas other physical findings are rather unspecific. The patients often display an autistic or autisticlike behavior, with gaze and body contact avoidance and no interest toward their peers.6,16,102 Expressive language may be absent or may remain very poor, and echolalias are common. Stereotypies are frequently seen, including hand flapping, hand wringing, and head turning.
A wide variety of seizures might occur in patients with inv dup(15)-syndrome, with age of onset ranging from 6 months to 9 years. Infantile spasms associated with a hypsarrhythmic EEG have been reported in several cases, while others were diagnosed as having Lennox-Gastaut syndrome or Lennox-Gastaut-like syndrome.5,143 These patients had tonic/atonic seizures (as head drops or drop attacks), tonic–clonic seizures, and atypical absences with onset between 4 and 8 years of age. Seizures are mostly difficult to control, despite adequate antiepileptic treatment.
Ring Chromosome 20 Syndrome
Ring chromosome 20 (r[20]) syndrome is a rare chromosomal disorder characterized by an indistinct phenotype, epilepsy, mild to moderate mental impairment, and (infrequently) malformation. Most patients are mosaics for the ring chromosome 20; however, the percentage of mosaicism in lymphocytes is not predictive for the severity of the epilepsy or the cognitive problems. All patients have a degree of learning difficulties varying from mild, specific difficulties to severe global learning disability with autistic features. The seizures start between 4 and 6 years of age, and thereafter a slowdown of motor and mental development becomes obvious. Sometimes even deterioration can be observed. Behavioral and adaptation difficulties are frequent, as are emotional immaturity and disturbed fine motor coordination.19,97 The ictal EEG in ring chromosome 20 patients shows slow theta waves and sharp spikes.24,68 Long runs of epileptiform activity in the EEG that are not accompanied by confusion or diminished consciousness are characteristic for ring chromosome 20 syndrome. Among other possible mechanisms, ring chromosomes can be formed after breakage in both chromosome arms, loss of the distal fragments, and subsequent
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fusion of the points of fracture. The loss of distal chromosomal material often explains the abnormal phenotype. Interestingly, the subtelomeric end of the long arm of chromosome 20 contains the two known epilepsy genes KCNQ2 and CHRNA4. It is possible that one or two of these genes are deleted in ring chromosome 20 syndrome, contributing to the cause of epilepsy in these patients.
Angelman Syndrome
Angelman syndrome is characterized by severe motor and intellectual retardation, ataxic gait, hypotonia, EEG abnormalities, epilepsy, absence of speech, microcephaly, and facial characteristics including a low forehead, macrostomia, and prominent mandible. The syndrome was first described by Harry Angelman, London, as “happy puppet syndrome,”3 a term referring to the often excessive, inappropriate laughter characteristic for patients with Angelman syndrome. The distinctive EEG discharges often start before the onset of seizures. The EEG pattern consists of high-amplitude bilateral spike-and-wave activity that is symmetric, synchronous, and most often monorhythmic with a slow-wave component at 2/s. In about 80% of the patients epilepsy sets in between 6 and 18 postnatal months. Seizure types include absence and myoclonic seizures. Insidious episodes of nonconvulsive or subtle myoclonic status can occur that are easily overlooked as children appear apathetic or in a state of neurologic regression. Seizures are difficult to control by antiepileptic treatment, but seizure frequency tends to decrease in later childhood.18,71,83
The genetic etiology of Angelman syndrome is complex, and the majority of cases are due to de novo mutations and are therefore sporadic. In approximally 60% of patients, a cytogenetically detectable deletion of chromosome region 15q11-q13 is found; in another 10% to 15% a submicroscopic deletion of the UBE3A gene (ubiquitin protein ligase E3A)–containing critical region for Angelman syndrome can be detected. The chromosome 15 carrying the deletion is always of maternal origin. The paternally inherited Angelman region on chromosome 15 is always inactivated (imprinted); thus, with the loss of the maternally inherited region no active genes remain. A further 3% to 5% of patients have paternal uniparental disomy of chromosome 15 (UPD15). In UPD15, chromosome 15 (or at least the parts of the chromosome containing the region 15q11-q13) is inherited from the father and the patient is missing a maternal copy. A possible mechanism for UPD15 could be a monosomy 15 conception, followed by a postzygotic duplication of the paternal chromosome 15. Familial occurrence of Angelman syndrome is only observed in some of the cases where the disorder is caused by a mutation either in the UBE3A gene or in the Angelman region-imprinting center. All types of mutations have the effect that UBE3A and other genes expressed exclusively from the maternal chromosome 15 are deleted or functionally silenced. UBE3A, although expressed from both alleles in most tissues, is transcribed predominantly from the maternal allele in brain. Another gene that is frequently deleted in Angelman patients is GABRB3, the gene coding for the β3 subunit of the GABAA receptor. The exact role of UBE3A and GABRB3 in the etiology of Angelman syndrome is still unknown. A possible mechanism might involve dysregulation of synaptic neurotransmission through the UBE3A-related modulation of functional GABAA receptor complexes.
Wolf-Hirschhorn Syndrome (4p- Syndrome)
Wolf-Hirschhorn syndrome (also known as deletion 4p syndrome or 4p- syndrome) is a contiguous gene syndrome located on the short arm of chromosome 4 in band p16.3. Approximately 87% of the patients carry a de novo deletion, while in the remainder one of the parents is the carrier of a balanced translocation. The characteristic facial features in Wolf-Hirschhorn syndrome include hypertelorism, prominent glabella, epicanthal folds, and cleft lip or palate. Additional features are microcephaly, cardiac defects, growth and mental retardation, and seizures. Epilepsy in Wolf-Hirschhorn syndrome usually starts within the first year of life, and seizures are initially difficult to control but tend to disappear with age. Characteristic are generalized or unilateral myoclonic seizures followed by brief atypical absences. The EEG typically shows centroparietal or parieto-occipital sharp waves, high-voltage waves with superimposed spikes, and bursts of diffuse spikes and waves during drowsiness and sleep, often associated with myoclonic jerks.111,145
The theretofore accepted critical region (WHSCR1) is a 165-kb interval on 4p16.3 defined by the loci D4S166 and D4S3327. Recently, Zollino et al.147 proposed a new critical region for Wolf-Hirschhorn syndrome, and referred to this region as WHSCR2. On the basis of genotype-phenotype correlation analysis, they recommended dividing the Wolf-Hirschhorn syndrome phenotype into two distinct clinical entities, a “classical” and a “mild” form. The exact genotype-phenotype correlations are not fully understood, but it is obvious that the severity of the phenotype strongly correlates with the 4p deletion size. WHSCR2 contains the gene LETM1 that can be considered as a candidate gene for the seizures observed in most Wolf-Hirschhorn patients. The LETM1 gene encodes a putative 83.5-kDa protein with a single transmembrane domain, two calcium-binding EF-hand motifs, a leucine zipper, and several α-helical structures with high probabilities for forming coiled coils. LETM1 shows significant amino acid sequence identity to mitochondrial proteins from different species and has been shown to be associated with mitochondrial morphology. The data suggest that the seizures and other neurologic features of Wolf-Hirschhorn syndrome may, at least in part, represent a disorder of mitochondrial dysfunction caused by haploinsufficiency of the LETM1 gene.40,108
Table 2 Genetic Disorders with Generalized Patterns of Abnormal Neuronal Migration
Type of malformation Disorder Gene Locus Protein Inheritance
Lissencephaly type 1 Isolated lissencephaly LIS1(PAFAH1B1) 17p13.3 Platelet-activating factor acetylhydrolase, isoform 1b, α-subunit Sporadic, AD
  Miller-Dieker syndrome Microdeletion including LIS1, 14-3-3-epsilon 17p13.3   Sporadic, AD
  X-linked lissencephaly/double cortex syndrome DCX(DBCN) Xq22.3-q23 Doublecortin XD
  Norman-Roberts syndrome RELN 7q22 Reelin AR
Cobblestone dysplasia Walker-Warburg syndrome POMT1
FCMD (FKTN)
9q34.1
9q31
Protein O-mannosyltransferase Fukutin AR
AR
  Fukuyama congenital muscle dystrophy FCMD (FKTN) 9q31 Fukutin AR
  Muscle-brain-eye disease POMGNT1 1p34-p33 O-mannose β-1,2-N-acetylglucosaminyltransferase AR
Heterotopia X-linked bilateral periventricular heterotopia FLNA (FLN1) Xq28 Filamin-A XD
  Periventricular nodular heterotopia with microcephaly (periventricular nodular heterotopia type 2) ARFGEF2 20q13.13 Brefeldin A-inhibited guanine nucleotide exchange protein AR
  Periventricular nodular heterotopia type 3 nn 5p nn nn
AD, autosomal dominant; AR, autosomal recessive; nn, not known; XD, X-linked dominant.
1p36 Deletion Syndrome
Terminal deletions of 1p36 occur in approximately 1 in 5,000 live births, making the 1p36 deletion syndrome (also named monosomy 1p36) one of the most common mental retardation syndromes in humans. The clinical features include craniofacial anomalies like tower skull with microcephaly, a prominent forehead, deep-set eyes, and a flat nasal bridge. Additional features are hearing loss, growth retardation, cardiomyopathy, and orofacial clefting. Some patients develop a Prader-Willi–like phenotype with obesity and hyperphagia in early childhood. Several patients have been documented to have cerebral atrophy, ventricular asymmetry, hydrocephalus, delayed myelination, or focal cortical dysplasia.14,112 Seizures occur in about 50% of patients and are of different types, including infantile spasm, simple/complex partial, generalized tonic–clonic, myoclonic, and absence spells. Seizures mostly start during infancy or childhood, and are in most patients well controlled by antiepileptic drugs. EEG abnormalities vary greatly and include focal and multifocal spikes, hypsarrhythmia, and slow-wave activity. Hemizygosity for the 1p36-deleted voltage-gated potassium channel gene KCNAB2 is associated with a severe seizure phenotype in 1p36 located syndrome.59,60
Neuronal Migration Disorders
In the human cortex, neuronal migration starts at approximately 7 weeks of gestation. Neurons originating from the proliferative ventricular zone migrate radially along
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specialized glial processes to their final locations. The correct migration depends on several factors, one of the most important being the contact between the migrating neuron and the radial glial fiber. This requires the interaction of adhesion molecules, trophic factors, and guidance molecules, all of them possible candidates for the various disorders of neuronal migration. A second mode of migration has been recently described, in which cells born in the ventricular zone migrate perpendicular to radial glial processes. This nonradial pathway is used by most future inhibitory interneurons. Disturbances of this complicated pattern of cortical development and migration can cause severe neurologic disorders that are often accompanied or characterized by seizures (Tables 2 and 3). Neuronal migration disorders can be noninherited or genetic with distinct inheritance patterns. The malformations found in nongenetic forms are often (but not always) focal, while in the genetic ones the pattern of abnormal neuronal migration is usually generalized. The group of genetic neuronal migration disorders includes different lissencephaly syndromes, disorders with neuronal dysplasia, abnormal neuronal proliferation, and several conditions with heterotopia. Two of the five genes underlying major syndromes with lissencephaly as well as the tuberous sclerosis complex will be exemplarily described here. (See Chapter 259 for further discussion).
Isolated Lissencephaly and Miller-Dieker Syndrome
Classical or type I lissencephaly is histopathologically characterized by four abnormally positioned layers instead of the normal six cortical layers. In magnetic resonance imaging (MRI) the main findings are a smooth brain with a severely thickened cortex and absent (agyria) or simplified (pachygyria) gyri or convolutions. Typical clinical features are global developmental delay, muscle hypotonia, and different seizure types including febrile seizures, absence seizures, and myoclonic jerks. Classical lissencephaly is most commonly caused by mutations in the LIS1 gene (also named PAFAH1B1, platelet-activating factor [PAF] acetylhydrolase, isoform 1B, α-subunit) on chromosome 17p13. LIS1 codes for the noncatalytic β-subunit of PAF acetylhydrolase, an inactivating enzyme for PAF. PAFs are lipid mediators involved in a variety of biologic and pathologic processes, and LIS1 is suspected to be involved in different regulatory pathways.126 Several molecules have already been identified that interact with LIS1 protein. One of them is dynein, a molecular motor responsible for cargo transport in cells that modulate neuronal migration via microtubule organization.4,125,128 LIS1 has also been implicated in functions like cell adhesion and cytokinesis. Heterozygous Lis1 mutant mice have been found to display defects in neuronal migration and layering comparable to those found in humans.22
Table 3 Genetic Disorders with Focal/Multifocal Patterns of Abnormal Neuronal Migration
Type of malformation Disorder Gene Locus Protein Inheritance
Focal subependymal nodular heterotopia Aicardi syndrome (Aicardi-Goutieres syndrome) nn 3p21 13q14-21 nn AR
  Zellweger syndrome   7q21 8q 6q 12 6p 1p36.2 22q11.21 Peroxin-1 Peroxin-2 Peroxin-3 Peroxin-5 Peroxin-6 Peroxin-14 Peroxin-26 AR
  Adrenoleukodystrophy (Bronze-Schilder disease, Siemerling-Creutzfeldt disease) ABCD1 (ALDP) Xq28 ATP-binding cassette transporter adrenoleukodystrophy protein XR
  Multiple acyl-CoA dehydrogenase deficiency (glutaric aciduria II) ETFA ETFB ETFDH 15q23-q25 19q13.3 4q32-qter Electron transfer flavoprotein, α-polypeptide
Electron transfer flavoprotein, β-polypeptide
Electron transfer flavoprotein dehydrogenase
AR
AD, autosomal dominant; AR, autosomal recessive; ATP, adenosine triphosphate; nn, not known; XR, X-linked recessive.
Microdeletions including not only LIS1, but also genes distal to LIS1, are the cause of Miller-Dieker syndrome (MDS). Patients with MDS are characterized by severe psychomotor retardation, failure to thrive, and intractable epilepsy. Typical craniofacial features are microcephaly, bitemporal narrowing, high forehead, small nose, protuberant upper lip, and micrognathia. Death usually occurs before 2 years of age. In most patients the microdeletion is de novo; however, families with balanced translocations and high recurrence risk are known. There is evidence that the greater severity of MDS compared to isolated lissencephaly may be due to deletion of the gene encoding 14-3-3-epsilon protein, which is also involved in cytoplasmic dynein function.130
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X-linked Lissencephaly/Double Cortex Syndrome
X-linked lissencephaly (XLIS) and double cortex syndrome (DCX; subcortical band heterotopia) are allelic disorders caused by mutations in the DCX/XLIS gene on Xq22.3-q23. XLIS, the male sex-determined manifestation of the two disorders, is characterized by classical lissencephaly, severe epilepsy, and mental retardation. Lethality is high, and family history often reveals multiple miscarriages of male fetus. In females mutations in the DCX/XLIS gene usually manifest as a milder phenotype known as double cortex syndrome, named after the typical broad heterotopic zone of neurons visible on MRI scans. LIS1 and DCX mutations differ with respect to their associated pattern of cortical manifestations. Whereas with LIS1 mutations the clinical manifestation is more severe over the parietal and occipital regions, the DCX/XLIS neuronal phenotype is more pronounced over the frontal cortex. The distinct patterns suggest that LIS1 and DCX/XLIS may be part of overlapping, but distinct, signaling pathways that are involved in neuronal migration. It is therefore not surprising that the DCX/XLIS protein has been found to be microtubule associated where it is assumed to have a stabilizing function.99
Tuberous Sclerosis
Tuberous sclerosis (TS) is an autosomal dominant multiorgan disorder characterized by a great inter- and intrafamilial variation in clinical severity. The phenotypic spectrum of TS includes seizures, mental retardation, renal dysfunction, and dermatologic features such as hypomelanotic macules, facial angiofibromas (adenoma sebaceum), and shagreen patches. Hamartomatous brain lesions, such as cortical tubers, sub- ependymal nodules (SENs), or subependymal giant cell astrocytomas (SEGAs), are typical focal cortical dysplasias found in TS patients. TS results from mutations in either of two genes, TSC1 on 9q34133 or TSC2 on 16p13.42 The proteins encoded by both genes, hamartin and tuberin, are thought to play important roles in several cell-signaling pathways. Both hamartin and tuberin interact with each other to build the intracellular tuberous sclerosis complex that functions as a guanosine triphosphatase (GTPase)-activating protein (GAP). Important functions of the complex are the enhancement of the intrinsic GTPase activity of Rheb and the inhibition of mTOR signaling.63 mTOR is a checkpoint kinase (target of rapamycin) that has been linked to numerous human cancers. TSC1 and TSC2 regulate the mTOR pathway to control translation and cell growth in response to nutrient and growth factor stimuli. Mutations in either TSC1 or TSC2 are likely to cause the cortical dysplasias underlying epilepsy in TS patients at least in part through dysregulation of the mTOR pathway.36
Summary and Conclusions
The examples presented in this chapter demonstrate that the different genes underlying epilepsies and syndromes with epilepsy are involved in a broad spectrum of diverse functions and functional pathways. There are gene mutations that cause progressive neurodegeneration as seen in the various subtypes of progressive myoclonus epilepsy including the neuronal ceroid lipofuscinoses, sialidoses, Lafora disease, and Unverricht-Lundborg disease. Mutations in another heterogeneous group of genes interfere with normal brain development and disturb the precisely orchestrated proliferative, migratory, and maturational events needed to form the mature six-layered cortex. Structural chromosomal aberrations that usually affect more than one gene represent a third example for the diversity of genetic mechanisms underlying epileptogenesis. Some of the chromosomal aberrations in which epilepsy is a constant finding have been discussed in this chapter, exemplary
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for syndromes in which epilepsy is not caused by the action of a single gene but by the combined action or failure of a number of genes within the aneuploid segment. As shown, one of the most important pathogenetic mechanisms in human epilepsy is based on mutations in various ion channel genes. With a few exceptions, all idiopathic epilepsies with known genes belong to the heterogeneous group of “channelopathies.” There are many mechanisms by which mutated ion channels can cause neuronal hyperexcitability, and the ongoing studies of various channelopathies have already contributed much to our understanding of the complexity of pathways that can lead from a single gene mutation to episodic symptoms.
The identification of additional genes and the functional characterization of their gene products will further increase our knowledge about pathogenic mechanisms in epileptogenesis. The growing knowledge will help future generations of neurologists to more precisely classify the epilepsies affecting their patients. It can also be expected to facilitate the development of new antiepileptic drugs for the effective treatment, and perhaps even prevention, of epilepsies.
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